Trim60 Dog pseudogene
 Pseudo-transcript (unspliced fragment)
ATGGAGTTTGTGACGGGCCTGACAAACCTCCAGGAGTCCAGCTGCCCCAT
CTGTCTGGACTACCTGAAAGACGCGGTGACTACAAACTGGGCACAACTTC
TATCGCTCCTGCATCAACATGATGTGGAAGGACATGGATGAGACCTTCCC
TTGTCCCGTCTGCTGATTTTGCTTTCATAACAAAAGCTTCAGGAGCAATC
GCCAGCTCTGCAATTTGACCGAAATTGCTGAACTACTGCAGGTCAGAAGG
AGCAAGAGGAAAAGGCAGGAAGAGTACTCTGTGTGTGAGAAGCACAATCA
GTTTCTGACCCTGTTTTGCGGGAAGGACCTGGAGGTTTTATGTACACAGT
GCAGTTTCTCCCTGCAACACCGGAAACACTACATTTGTCCCATCAAGAAA
GCTGCATCTTTTCACAGGAAGATTCTAGAATATAGTATTGACCCCTTGAA
AGACAATATGGAATGAGTAGAAAAAGTGATAATGCTTCAAGCCAGCAATT
AGTGGAAGAAAAAGAGTTTAGGAGAGAAGAAATCCTTTCCAAATTTGAGC
AAATTAGACTGTTTCTACAGAATCAGCAGGAGGCTCTTCTTAAGCAGATG
GAAGATGAAGAAAGGGACATTTTAACAAAACTAGCCGAACACTGTACAAC
ATTTTCAGGTCATGTGTCCACATTAAGACGTCTGCTGAAGGAGGTGGAGT
CCAAGCATATGCAGTCAGACCTGGACTTTCTGACACACGTTAAGGGTATC
CACCACAGGTATGAAACCTGGAATATCTGGAGCTCTTCTTATTCCAATTA
AAGAAATATGGATTTAGCCTTCCTCCACAGTATTCTGGCTTGGACAGAAT
CCTCAAGCCCTTTCAGGTAGACGTGATTCTAGATCTTGAAACAGCACTCC
CTCGGCTTGTTGTCTCCTAGGATAGAAAAACTGTGATACAGAAAGAGAAA
AAAAGCATCTCTGTTATAACCCAAGGAGATTTTATCTCTGCCCTCCTGTC
CTGGGTTCTAGGAGATTTAGTTCTGGCCGGCATTACTGGGAAGTAGAAGT
GGAAAACAAGCCTAAATGGACCTTGGGGGTGTCTTGAGACTGTTTCCTTC
AGAATTGGTGGAATCGGCCAGTAGTTGAGGGTGGATTCGGGGCGATTGGG
AGATACGTTGAGAGCATTTATATTATGCTGGGTCCTAAGAGAACCTAGTT
TCTGCCTGTAGTAAACCCAAGTAAGGTTGGCATTTTTGTGGACTGTGAGT
TAGGGGAGATTTCCTTTTACAATATGAATGATAGATCTCTTCTCTATACT
TGTAATGATTATTTTTTTTAACGTGGGTTTATTCTTTTTTTAAAGATTTT
ATTTATTCATAGAGATGCAGAGAGAGAGAGAGAGAGAGAGGCAGAGACAC
A
 
 Comparison with other mammals
Hs = Homo sapiens
Cf = Canis familiaris
Mm = Mus musculus
            1                                                         60
Hs ATGGAGTTTGTGACAGCCCTGGTGAACCTCCAAGAGGAGTCTAGCTGTCCCATCTGTCTG
Cf ATGGAGTTTGTGACGGGCCTGACAAACCTCCA---GGAGTCCAGCTGCCCCATCTGTCTG
Mm ATGGACTCC---ACAGCCCTAAAAATCTTGCAGGACAAATGTATCTGTTACATTTGTTCG

61 120
Hs GAGTACTTGAAAGACCCAGTGACCATCAACTGTGGGCACAACTTCTGTCGCTCCTGCCTC
Cf GACTACCTGAAAGACGCGGTGACTACAAACTG--GGCACAACTTCTATCGCTCCTGCATC
Mm GATTTCATGGAAGACCCAGTGACCAGTAGGTGTGGGCACAACTTCTGTTTTGCCTGCCTC

121 180
Hs AGTGTATCCTGGAAGGATCTAGATGATACCTTTCCCTGTCCTGTCTGCCGTTTTTGCTTT
Cf AACATGATGTGGAAGGACATGGATGAGACCTTCCCTTGTCCCGTCTGCTGATTTTGCTTT
Mm CGTTTGCTCTGGGATGATCTACAAGGCAACATCTTCTGTCCCGTCTGTCAAACCCCCTTT

181 240
Hs CCATACAAGAGCTTCAGGAGGAACCCCCAGCTCCGTAATTTGACTGAAATTGCTAAACAA
Cf CATAACAAAAGCTTCAGGAGCAATCGCCAGCTCTGCAATTTGACCGAAATTGCTGAACTA
Mm CCACCGAAAAGCTTCAGCAGGAACTACCAGTTCCGTAACATGACTGAAACCATTAGGCTC

241 300
Hs CTCCAGATTAGGAGGAGCAAGAGAAAGAGGCAGAAAGAGAATGCCATGTGTGAAAAACAC
Cf CTGCAGGTCAGAAGGAGCAAGAGGAAAAGGCAGGAAGAGTACTCTGTGTGTGAGAAGCAC
Mm CTGCAAAAGAGACAGAGCAAGAGGAAGAGGCAGGAAGAACACACAGTATGTCCGAAGCAT

301 360
Hs AACCAGTTTCTGACCCTCTTCTGTGTTAAAGATCTAGAGATCTTATGTACACAGTGCAGT
Cf AATCAGTTTCTGACCCTGTTTTGCGGGAAGGACCTGGAGGTTTTATGTACACAGTGCAGT
Mm GATCAGCCTCTGGTCTTGTTCTGTGTGAGGGATCGGGATGTCTTATGTACCCAGTGTAGC

361 420
Hs TTCTCCACTAAACACCAGAAGCACTACATTTGCCCTATTAAGAAAGCTGCCTCTTATCAC
Cf TTCTCCCTGCAACACCGGAAACACTACATTTGTCCCATCAAGAAAGCTGCATCTTTTCAC
Mm CTCTCTGTCGAACACCAGGGCCATTACACCTGCCCCATTAAGAAAGCCAGCTCTTATCAC

421 480
Hs AGAGAAATTCTAGAAGGTAGCCTTGAGCCCTTGAGGAATAATATAGAACGAGTTGAAAAA
Cf AGGAAGATTCTAGAATATAGTATTGACCCCTTGAAAGACAATATGGAATGAGTAGAAAAA
Mm AGGAAAGTCCTAGAGAGCGCCATTGCAACGTTAAAGTTCGGAGTGAAACAAGTTGAAGAA

481 540
Hs GTGATAATTCTGCAAGGCAGCAAATCAGTGGAGCTGAAAAAGAAGGTAGAATATAAGAGG
Cf GTGATAATGCTTCAAGCCAGCAATTAGTGGAAGAAAAA----------GAGTTTAGGAGA
Mm AAGCTAGCTGTGCAGCACAGAAGGGTTCTTGGACTGAGGGAGGAGGCTCAATATCAAAAA

541 600
Hs GAAGAAATAAATTCTGAGTTTGAGCAAATAAGATTGTTTTTACAGAATGAACAAGAGATG
Cf GAAGAAATCCTTTCCAAATTTGAGCAAATTAGACTGTTTCTACAGAATCAGCAGGAGGCT
Mm ATAGAGATACGTTATGAAATTGGGCAAATCAAACTGTTCCTACAAAGTGAGTACGAAGCG

601 660
Hs ATTCTTAGGCAGATACAAGATGAAGAGATGAACATTTTAGCAAAACTAAATGAAAACCTT
Cf CTTCTTAAGCAGATGGAAGATGAAGAAAGGGACATTTTAACAAAACTAGCCGAACACTGT
Mm CATCTAAATGAGAGCCACATGGAGGAGCTGCGGAGTTTCTCAGAACTGAATGGATATCTT

661 720
Hs GTAGAACTTTCAGATTATGTTTCCACATTAAAACATCTACTGAGGGAGGTAGAGGGCAAG
Cf ACAACATTTTCAGGTCATGTGTCCACATTAAGACGTCTGCTGAAGGAGGTGGAGTCCAAG
Mm GAGACCCTGTTAGACCATGTTTCCACAGCAAAAGATCTGTTGAAGGAAGTGGAGGCCATA

721 780
Hs TCTGTGCAGTCAAACCTGGAATTACTGACACAAGCTAAGAGTATGCACCACAAGTATCAA
Cf CATATGCAGTCAGACCTGGACTTTCTGACACACGTTAAGGGTATCCACCACAGGTATGAA
Mm CATGAAAGGTCAGATGTCACACTCCTGAGAGCCT------------ACCACAAGTTGCAA

781 840
Hs AACCTAAAATGCCCTGAACTCTTTTCATTTAGATTAACAAAATATGGTTTCAGTCTTCCT
Cf A-CCTGGAATATCTGGAGCTCTTCTTATTCCAATTAAAGAAATATGGATTTAGCCTTCCT
Mm AACCTTAAATCCCCCAAACCGTGGTTATTTAGGACAAAGCAATATGGCCTCAGTCTCCCA

841 900
Hs CCTCAATATTCTGGCTTGGACAGAATTATCAAGCCATTTCAAGTAGATGTGATTCTAGAT
Cf CCACAGTATTCTGGCTTGGACAGAATCCTCAAGCCCTTTCAGGTAGACGTGATTCTAGAT
Mm GCGCAGTATTCTGGCTTGAGCAGAATCATCAAGCAATTTCAAGCAGATGTGACTTTTGAT

901 960
Hs CTCAACACAGCACATCCTCAACTTCTTGTCTCTGAGGATAGAAAAGCTGTGCGATATGAA
Cf CTTGAAACAGCACTCCCTCGGCTTGTTGTCTCCTAGGATAGAAAAACTGTGATACA-GAA
Mm CGTGACACAGCACACCCTCAGCTGGTTATTTCTGAGGATAGAAAATCTGTGTTTTATAAA

961 1020
Hs AGAAAAAAACGAAACATTTGTTATGACCCAAGGAGATTTTATGTCTGCCCTGCTGTCCTA
Cf AGAGAAAAAAAGCATCTCTGTTATAACCCAAGGAGATTTTATCTCTGCCCTCCTGTCCTG
Mm GAAGCATGGCCATGTGTGTGTGCTAGCCCTCAGAAATTTCACCTCTGGCCCGCTCTCCTG

1021 1080
Hs GGCTCTCAGAGATTTAGTTCTGGCCGACATTACTGGGAAGTAGAAGTGGGAAACAAACCT
Cf GGTTCTAGGAGATTTAGTTCTGGCCGGCATTACTGGGAAGTAGAAGTGGAAAACAAGCCT
Mm GGATGTAAAGGATTCGATTCTGGTCGACAGTACTGGGAAGTCAAAGTGGGAGACAAGCCC

1081 1140
Hs AAATGGATATTGGGTGTGTGTCAAGACTGTCTTCTTAGGAACTGGCAGGATCAGCCATCA
Cf AAATGGACCTTGGGGGTGTCTTGAGACTGTTTCCTTCAGAATTGGTGGAATCGGCCAGTA
Mm AGATGGACACTGGGTGTGTGTCAAGCCCACTTTTCTGGGGACTGGAGCAATCAGTCCTCA

1141 1200
Hs GTTCTGGGCGGATTCTGGGCAATTGGGCGATACATGAAGAGTGGTTATGTTGCGTCAGGT
Cf GTTGAGGGTGGATTCGGGGCGATTGGGAGATACGTTGAGAGCATTTATATTATGCTGGGT
Mm GGT---------TTCTGGGCAATTGGGCGGTATGCTGAGAATAGTTATGTCACCTATGGA

1201 1260
Hs CCTAAGACAACCCAGCTTCTGCCAGTAGTAAAACCCAGTAAAATTGGTATTTTTCTGGAC
Cf CCTAAGAGAACCTAGTTTCTGCCTGTAGTAAACCCAAGTAAGGTTGGCATTTTTGTGGAC
Mm CCTCTAAGAACGGAGTTTCTGCCAGTGGTGCGACCCAGCAAGGTCGGCATATTTTTGGAT

1261 1320
Hs TATGAATTGGGTGATCTTTCCTTTTATAATATGAATGATAGGTCTATTCTCTATACTTTT
Cf TGTGAGTTAGGGGAGATTTCCTTTTACAATATGAATGATAGATCTCTTCTCTATACTTGT
Mm TATGAATTGGGTGAGCTCTCCTTTTATAATATGAATGACAGGTCTCTTCTCTACACTTTC

1321 1380
Hs AACGATTGTTTCACAGAAGCCGTTTGGCCTTATTTCTATACTGGAACAGATTCCGAACCT
Cf AATGATTATTTTTTTTAACGTGGGTTTATTCTTTTTTTAA-------AGATTTTATTTAT
Mm AGGAATTCTTTTACCAGCACCCTTTGGCCTTATTTCTATATAGGAACAGATTCTGAATCT

1381 1432
Hs CTTAAAATCTGCTCAGTATCAGATTCTGAAAGATAA
Cf TCATAGAGATGCAGAGAGAGAGAGAGAGAGAGAGGCAGAGACACA
Mm CTTGAAATCTTAACCCACCCCACCCCAGACACAGGGTCTTACTAA
 
BACK to index