Trim5 Dog pseudogene
 Pseudo-transcript (tentative spliced fragment)
ATGGCTTTTAAATTCCTAACATAGAGGGGGTGGTGATCTGCTCCATCTGC
CTGGTCCTCCTGAGATAACCACCGAGCCTGGAATGTGGCCACAGCTTCTG
TAAAGCCTGCTTTACTGCAGACAACAAGGAGTCCATGCCAAGCCAAGGAG
GGAAGAACAGAAATTTCCCTGTATGCTGCATCAGTTACTGTGCTGCGGAC
CTGCGGCCTAACTGGCATGTGGTCGACATAGTAGAGTGGCTCAGAGAGCC
CAAGGTGAGCCCTGAGGAGGGCCAGAAGAGAAATCTCTGTGAGCACCACA
AAGAGAAACTCTTGTTCTTCTGTAAGGAGGATGGGAAAGTCATTTGCTGG
CTTTGTGAGTGGTCTCAGGAGCACCATGGTCTCCACATGGTCCCAATGGA
GAAAGTTGCCCAGGAGTACCAGAGAAACTCCAAGCGGCTCTGCAGAAACT
GAGGAAGAAGTAGCAGGAAGCTGAGATGTTGGAAGCTGTCATCAGAGAAG
AGAATACTTTCTGCAAGAATCAAATGCAAAATGAGAAAAGGCTTGTCTAG
GCACAGTTTAAAAAACTAAAGACTATCCTGGAGCATGAGGAACTGAGGAT
GGTGCAGAAGCTGCAGTGCCAGGAGAATGCTGTTCTCAATACCCAGGGTA
CATCATGCATTGGTGATGAGCTGGTCCAGCAAAGCCAGATGTAAGAGACC
TGATCTCGGTTCTGGAGCATCAGCTTCAGGGGTCAACAGTAAACATGCAG
CATGATGTGAACCACATCACAGAAAGGAGTGAGAACTTGAGCTGAAGAAA
CCAAAACTTTTCTCAAGGAATGAAAGAAAGTGTTCTGAGTTTCTAATCTG
AAAGGGATAATACAAGCGATTAGAGAGCTGACACACGTAGCACTACTGAG
CTCATATGACTCCAGATAATGCCAAAAATAACAACATATGCTATTTCTAC
AGATCAAAGACAAATGAGATATGTGTTTCATTGGAAACTAGATAATGCAT
ATAATAGCAGTTATGGTGTCCTTGGCTCCCTGGTCATTGGATTGGGGAAA
CATTACTGGGAGGTAGATCCTGGAGGTATAAGATGGAAAATGCCCAGAAT
ACATTATGAAATTTCATGTTAGACATGATTAAAATTATCAACATAGTTAC
TCTAGGTTTCAACCAAATATGACCACTGCATTAAACGGTGATGAATCAAC
TTTATAATGCTTTTGAGGAGTCATCCTTCTCTGATCTCCTCATCTTAATC
CTGACCCTGCCTGTCATTCTCCATAGGTTTTCCTAGACTATGAGGCTGGC
ATTGTCTTATTTTTCAATGTCACAAACTATGGGTTTCTCATCTATACGTT
CTTTTCATTTTCCTCTTCTCAGGAAGCTTTTCCATATTTCAGCCCCATGA
AATGGAATGACCCCATCATGACTCTGCTCTCCAAGCTCTTGA
 
 Comparison with other mammals
Hs = Homo sapiens
Cf = Canis familiaris
            1                                                         60
Hs ATGGCTTCTGGAATCCTGGTTAATGTAAAGGAGGAGGTGACCTGCCCCATCTGCCTGGAA
Cf ATGGCTTTTAAATTCCT----AACATAGAGGGGGTGGTGATCTGCTCCATCTGCCTGGTC

61 120
Hs CTCCTGACACAACCCCTGAGCCTGGACTGCGGCCACAGCTTCTGCCAAGCATGCCTCACT
Cf CTCCTGAGATAACCACCGAGCCTGGAATGTGGCCACAGCTTCTGTAAAGCCTGCTTTACT

121 180
Hs GCAAACCACAAGAAGTCCATGCTAGACAAAGGAGAGAGTAGCTG------CCCTGTGTGC
Cf GCAGACAACAAGGAGTCCATGCCAAGCCAAGGAGGGAAGAACAGAAATTTCCCTGTATGC

181 240
Hs CGGATCAGTTACCAGCCTGAGAACATACGGCCTAATCGGCATGTAGCCAACATAGTGGAG
Cf TGCATCAGTTACTGTGCTGCGGACCTGCGGCCTAACTGGCATGTGGTCGACATAGTAGAG

241 300
Hs AAGCTCAGGGAGGTCAAGTTGAGCCCAGAGGGG---CAGAAAGTTGATCATTGTGCACGC
Cf TGGCTCAGAGAGCCCAAGGTGAGCCCTGAGGAGGGCCAGAAGAGAAATCTCTGTGAGCAC

301 360
Hs CATGGAGAGAAACTTCTACTCTTCTGTCAGGAGGACGGGAAGGTCATTTGCTGGCTTTGT
Cf CACAAAGAGAAACTCTTGTTCTTCTGTAAGGAGGATGGGAAAGTCATTTGCTGGCTTTGT

361 420
Hs GAGCGGTCTCAGGAGCACCGTGGTCACCACACGTTCCTCACAGAGGAGGTTGCCCGGGAG
Cf GAGTGGTCTCAGGAGCACCATGGTCTCCACATGGTCCCAATGGAGAAAGTTGCCCAGGAG

421 480
Hs TACCAAGTGAAGCTCCAGGCAGCTCTGGAGATGCTGAGGCAGAAGCAGCAGGAAGCTGAA
Cf TACCA-GAGAAACTCCAAGCGGCTCTGCAGAAACTGAGGAAGAAGTAGCAGGAAGCTGAG

481 540
Hs GAGTTAGAAGCTGACATCAGAGAAGAGAAAGCTTCCTGGAAGACTCAAATACAGTATGAC
Cf ATGTTGGAAGCTGTCATCAGAGAAGAGAATACTTTCTGCAAGAATCAAATGCAAAATGAG

541 600
Hs AAAACCAACGTCTTGGCAGATTTTGAGCAACTGAGAGACATCCTGGACTGGGAGGAGAGC
Cf AAAAGGCTTGTCTAGGCACAGTTTAAAAAACTAAAGACTATCCTGGAGCATGAGGAACTG

601 660
Hs AATGAGCTGCAAAACCTGGAGAAGGAGGAGGAAGACATTCTGAAAAGCCTTACGAACTC-
Cf AGGATGGTGCAGAAGCTGCAGTGCCAGGAGAATGCTGTTCTCAATACCCAGGGTACATCA

661 720
Hs -----TGAAACTGAGATGGTGCAGCAGACCCAGTCCCTGAGAGAGCTCATCTCAGATCTG
Cf TGCATTGGTGATGAGCTGGTCCAGCAAAGCCAGATG-TAAGAGACCTGATCTCGGTTCTG

721 780
Hs GAGCATCGGCTGCAGGGGTCAGTGATGGAGCTGCTTCAGGGTGTGGATGGCGTCATAAAA
Cf GAGCATCAGCTTCAGGGGTCAACAGTAAACATGCAGCATGATGTGAACCACATCACAGAA

781 840
Hs AGGACGGAGAACGTGACCTTGAAGAAGCCAGAAACTTTTCCAAAAAATCAAAGGAGAGTG
Cf AGGAGTGAGAACTTGAGCTGAAGAAACCAA--AACTTTTCTCAAGGAATGAAAGAAAGTG

841 900
Hs TTTCGAGCTCCTGATCTGAAAGGAATGCTAGAAGTGTTTAGAGAGCTGACAGATGTCCGA
Cf TTCTGAGTTTCTAATCTGAAAGGGATAATACAAGCGATTAGAGAGCTGACACACGTAGCA

901 960
Hs CGCTACTGGGTTGATGTGACAGTGGCTCCAAACAACATTT-CATGTGCTGTCATTTCTGA
Cf C--TACTGAGCTCATATGACTCCAGATAATGCCAAAAATAACAACATATGCTATTTCTAC

961 1020
Hs AGATAAGAGACAAGTGAGCTCTCCGAAACCACAGATAATATATGGGGCACGAGGGACAAG
Cf AGATCAAAGACAAATGAGATATGTGTTTCATTGGAAACTAGATAATGCA-----------

1021 1080
Hs ATACCAGACATTTGTGAATTTCAATTATTGTACTGGCATCCTGGGCTCTCAAAGTATCAC
Cf -------------------TATAATAGCAGTTATGGTGTCCTTGGCTCCCTGGTCATTGG

1081 1140
Hs ATCAGGGAAACATTACTGGGAGGTAGACGTGTCCAAGAAAACTGCTTGGATCCTGGGGGT
Cf ATTGGGGAAACATTACTGGGAGGTAGA-----------------------TCCTGGAGGT

1141 1200
Hs ATGTGCTGGCTTCCAACCTGATGCAATG------TGTAATATTGAAAAAAATGAAAATTA
Cf ATAAGATGGAAAATGCCCAGAATACATTATGAAATTTCATGTTAGACATGATTAAAATTA

1201 1260
Hs TCAACCTA--------------------AATACGGCTACTGGGTTATAGGGTTAGAGGAA
Cf TCAACATAGTTACTCTAGGTTTCAACCAAATATGACCACTGCATTAAACGGTGATGAATC

1261 1320
Hs GGAGTTAAATGTAGTGCTTTCCAGGATAGTTCCTTCCATACTCCTTCTGTTCCTTTCATT
Cf AACTTTA----TAATGCTTTTGAGGAGTCATCCTTC---------TCTGATCTCCTCATC

1321 1380
Hs GTGCCCCTCTCTGTGATTATTTGTCCTGATCGTGTTGGAGTTTTCCTAGACTATGAGGCT
Cf TTAATCCTGACCCTGCCTGTCATTCTCCATAG-------GTTTTCCTAGACTATGAGGCT

1381 1440
Hs TGCACTGTCTCATTCTTCAATATCACAAACCATGGATTTCTCATCTATAAGTTTTCTCAC
Cf GGCATTGTCTTATTTTTCAATGTCACAAACTATGGGTTTCTCATCTATACGTTCTTTTCA

1441 1500
Hs TGTTCTTTTTCTCAGCCTGTATTTCCATATTTAAATCCTAGAAAATGTGGAGTCCCCATG
Cf TTTTCCTCTTCTCAGGAAGCTTTTCCATATTTCAGCCCCATGAAATGGAATGACCCCATC

1501 1525
Hs ACT-CTGTGCTCACCAAGCTCTTGA
Cf ATGACTCTGCTCTCCAAGCTCTTGA
 
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