TRIM50
 Multiple alignment of mammalian peptides
Hs = Homo sapiens
Cf = Canis familiaris
Bt = Bos taurus
Mm = Mus musculus Rn =Rattus norvegicus
            1                                                              60
Hs MAWQVSLLEL EDWLQCPICL EVFKEPLMLQ CGHSYCKGCL VSLSCHLDAE LRCPVCRQAV
Cf MAWQVSVPEL EDRLQCPICL EVFKEPMMLQ CGHSYCKGCL VSLSRHLDSE LRCPVCQQEV
Bt MAWQVSVPEL EDRLQCPMCL EVFKEPLMLQ CGHSYCKGCL VSLSHHLASE LRCPVCRQEV
Mm MAWRLTVPEL QDQLQCPICL EVFKEPLMLQ CGHSYCKDCL DNLSQHLDSE LCCPVCRQSV
Rn MAWQLTVPEL QDQLQCPICL EVFKEPLMLQ CGHSYCKNCL DSLSEHLDSE LRCPVCRQSV

61 120
Hs DGSSSLPNVS LARVIEALRL PGDPEPKVCV HHRNPLSLFC EKDQELICGL CGLLGSHQHH
Cf DSSSSPPNVS LARVIEALQF PGDPEPKVCE HHRNPLSLFC ERDQELICGL CGLLGSHQHH
Bt DYSSSPPNVS LAKVIEALRL PGDPEPQVCA HHRNPLSLFC EKDQELICGL CGLLGAHQHH
Mm DCSSSPPNVS LARVIDALRL PGDIEPTVCV HHRNPLSLFC EKDQEFICGL CGLLGSHQHH
Rn DCSSSPPNVS LARVIDALRL PGDTEPTVCV HHRNPLSLFC EKDQEFICGL CGLLGSHQHH

121 180
Hs PVTPVSTVYS RMKEELAALI SELKQEQKKV DELIAKLVNN RTRIVNESDV FSWVIRREFQ
Cf RVTPASTVYS RMKEELAALI SDLKREQKKV DEHIAKLVNN RTRIVNESDV FSWVIRREFQ
Bt RVTPVSTVYS RMKEELAALI SDLKQEQKKV DEQIAKLVNN RTRIVNESDV FSWVIRREFQ
Mm RVTPVSTVYS RMKEELAGRI SELKEEHRNV EEHIGKLVNN RTRIINESDV FSWVIRREFQ
Rn RVTPVSTVYS RMKEELAGRL SELKEQHRDV EEHIGKLVNN RTRIINESDV FSWVIRREFQ

181 240
Hs ELHHLVDEEK ARCLEGIGGH TRGLVASLDM QLEQAQGTRE RLAQAECVLE QFGNEDHHKF
Cf ELHHLVDEEK ARCLEGLEGH TRGLVASLDM QLEQAQGTQE RLVQAERVLE QFSNENYHKF
Bt ELHHLVDEEK ARCLEGVEGH TRGLVASLDM QLEQARGAQE RLVQATGVLE QFGSESHHEF
Mm ELHHLVDEEK ARCLEGLEGH TRGLVASLDM QLEQAQGTQE RLAQAEQVLE QFGNESHHEF
Rn ELHHLVDEEK ARCLEGVESH TRGLVASLDM QLEQAQGTQE RLAQAERVLE QFGNESHHEF

241 300
Hs IR-FHSMASR AEMPQARPLE GAFSPISFKP GLHQADIKLT VWKRLFRKVL PAPEPLKLDP
Cf IQNYHSMVSS TELQQARPLE GTFSPISFKP GLHQADIKLT VWKRLFRKVL PAPESLKLDP
Bt IRKYHAMASR PELQQARLSE GAFSPISFKP GLHQADIKLT VWKRLFRKVL PAPESLKLDP
Mm IR-FHSVASR AEVQQARPLE GVFSPISFKP ALHQADIKLT VWKRLFRKVL PAPASLKLDP
Rn IR-FHSITSR GEVQQARPLE GVFSPISFKP ALHQADIKLT VWKRLFRKVL PAPESLKLDP

301 360
Hs ATAHPLLELS KGNTVVQCGL LAQRRASQPE RFDYSTCVLA SRGFSCGRHY WEVVVGSKSD
Cf ATAHPLLELS KGNTVVQCGL LAQRRASQPE RFDYSTCVLA NQGFSCGRHY WEVVVGNKSD
Bt ATAHPLLELS KGNTVVQCGL LAQRRASQPE RFDYSTCVLT SRGFSCGRHY WEVVVGSKSD
Mm ATAHPLLELS KGNTVVHCGL LAQRRASQPE RFDYSTCVLA SKGFSWGRHY WEVVVGSKSD
Rn ATAHPLLELS KGNTVVHCGL LAQRRASQPE RFDYSTCVLA SKGFSWGRHY WEVVVGSKSD

361 420
Hs WRLGVIKGTA SRKGKLNRSP EHGVWLIGLK EGRVYEAFAC PRVPLPVAGH PHRIGLYLHY
Cf WRLGVIKGTA SRKGKLSKSP ENGMWLIGLK EGRVYEAFSC PRVPLPVAGH PHRIGVYLHY
Bt WRLGVIKGTA SRKGKLSKSP EHGVWLIGLK EGRVYEAFGC PRVPLPVAGH PHRIGIYLHY
Mm WRLGVIKGTA SRKGKLNKSP EHGVWLIGLK EGRVYEAFGC PRLPLPVAGH PHRIGVYLHY
Rn WRLGVIKGTA SRKGKLSKSP EHGVWLIGLK EGRLYEAFGC PRLPLPVAGH PHRIGVYLHY

421 480
Hs EQGELTFFDA DRPDDLRPLY TFQADFQGKL YPILDTCWHE RGSNSLPMVL PPPSGPGPLS
Cf EQGELTFFDA DRPDDLRLLY TFQADFQGKL YPILDTCWHE RGSNTLPMVL SPPSGPVHLT
Bt EQGELTFFDA DRPDDLRPLY SFQADFQGKL YPILDTCWHE RGSNSLPMVL PPPSGPGHLS
Mm EQGELTFFDA DRPDDLRTLY TFQADFQGKL YPILDTCWHE RGSNSLPMVL PPPSGPGHFT
Rn EQGELTFFDA DRPDDLRALY TFQADFQGKL YPILDTCWHE RGSNSLPMVL PPPSAPGHLT

481
Hs PEQPTKL
Cf PPQPTKL
Bt PLQPTKL
Mm LGQV
Rn RAQV
 
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