Trim61 Dog pseudogene
 Pseudo-transcript (unspliced fragment)
ATGGAGTTTGTGACGGGCCTGACAAACCTCCAGGAGTCCAGCTGCCCCAT
CTGTCTGGACTACCTGAAAGACGCGGTGACTACAAACTGGGCACAACTTC
TATCGCTCCTGCATCAACATGATGTGGAAGGACATGGATGAGACCTTCCC
TTGTCCCGTCTGCTGATTTTGCTTTCATAACAAAAGCTTCAGGAGCAATC
GCCAGCTCTGCAATTTGACCGAAATTGCTGAACTACTGCAGGTCAGAAGG
AGCAAGAGGAAAAGGCAGGAAGAGTACTCTGTGTGTGAGAAGCACAATCA
GTTTCTGACCCTGTTTTGCGGGAAGGACCTGGAGGTTTTATGTACACAGT
GCAGTTTCTCCCTGCAACACCGGAAACACTACATTTGTCCCATCAAGAAA
GCTGCATCTTTTCACAGGAAGATTCTAGAATATAGTATTGACCCCTTGAA
AGACAATATGGAATGAGTAGAAAAAGTGATAATGCTTCAAGCCAGCAATT
AGTGGAAGAAAAAGAGTTTAGGAGAGAAGAAATCCTTTCCAAATTTGAGC
AAATTAGACTGTTTCTACAGAATCAGCAGGAGGCTCTTCTTAAGCAGATG
GAAGATGAAGAAAGGGACATTTTAACAAAACTAGCCGAACACTGTACAAC
ATTTTCAGGTCATGTGTCCACATTAAGACGTCTGCTGAAGGAGGTGGAGT
CCAAGCATATGCAGTCAGACCTGGACTTTCTGACACACGTTAAGGGTATC
CACCACAGGTATGAAACCTGGAATATCTGGAGCTCTTCTTATTCCAATTA
AAGAAATATGGATTTAGCCTTCCTCCACAGTATTCTGGCTTGGACAGAAT
CCTCAAGCCCTTTCAGGTAGACGTGATTCTAGATCTTGAAACAGCACTCC
CTCGGCTTGTTGTCTCCTAGGATAGAAAAACTGTGATACAGAAAGAGAAA
AAAAGCATCTCTGTTATAACCCAAGGAGATTTTATCTCTGCCCTCCTGTC
CTGGGTTCTAGGAGATTTAGTTCTGGCCGGCATTACTGGGAAGTAGAAGT
GGAAAACAAGCCTAAATGGACCTTGGGGGTGTCTTGAGACTGTTTCCTTC
AGAATTGGTGGAATCGGCCAGTAGTTGAGGGTGGATTCGGGGCGATTGGG
AGATACGTTGAGAGCATTTATATTATGCTGGGTCCTAAGAGAACCTAGTT
TCTGCCTGTAGTAAACCCAAGTAAGGTTGGCATTTTTGTGGACTGTGAGT
TAGGGGAGATTTCCTTTTACAATATGAATGATAGATCTCTTCTCTATACT
TGTAATGATTATTTTTTTTAACGTGGGTTTATTCTTTTTTTAAAGATTTT
ATTTATTCATAGAGATGCAGAGAGAGAGAGAGAGAGAGAGGCAGAGACAC
A
 
 Comparison with other mammals
Hs = Homo sapiens
Cf = Canis familiaris
Mm = Mus musculus
            1                                                         60
Hs ATGGAATTTGTTACGGCCCTGGCTGACCTCCGAGCAGAGGCTAGCTGTCCCATCTGTCTG
Cf ATGGAGTTCATAACAGCCCTGGCTGACCTCCATACGGGGGCTAGCTGTCCCAT-TGTCTA
Mm ATGGAGCTTGCTGCAGGGCTGGCCGATCTCCAAGCAGAGGCTCGCTGTTCTGTCTGTAAG

61 120
Hs GACTACTTGAAAGACCCAGTGACCATCAGCTGTGGGCATAACTTCTGTCTCTCCTGCATC
Cf GACTACTTCAAAGAGCCAGTGACCACTAACTGTAGGCATAACTTCTGTCTCTCCTGCATC
Mm GAATACCTCAAGAACCCAGGGACCATGGAGTGTGGCCATAAAGTCTGTCTGTCCTGCACC

121 180
Hs ATTATGTCCTGGAAGGATCTACATGATAGTTTCCCCTGCCCCTTTTGCCACTTTTGCTGT
Cf AGTATGTCCTGGAAAGATCTAAGTGATACTTTCCCCTGCCCCTTTTGCCGTCACAGCTCT
Mm AGTGTGTTCTGGGAGGATCTAAAGGGTAGTGTCCCCTGCCCCTCTTGTCATTTGAACTGT

181 240
Hs CCAGAAAGGAAATTTATAAGCAATCCCCAGCTGGGTAGTTTGACTGAAATTGCTAAGCAA
Cf CCAGAAAGGAAATTCACCAATAATCCCCAACTGGGCAATTTGATTTAAATTGCTAAGCTA
Mm CCAGGAAGGAACTTTTTGAGTAATCAGCCACCAGGTGAGTTCACCGAAGTTGCCATCTTG

241 300
Hs CTCCAGATAAGAAGCAAGAAGAGGAAGAGGCAGGAAGAGAAGCATGTGTGTAAGAAGCAT
Cf CTACAGATAAGAAGCAAGA---GGAAGAGGAAGGAAGAGAAGCTTGTATGTGAAAAACA-
Mm CCCCCTGAAAGAACTAGCAGGAGTGGAAGGCAAGAAGGAGAGCATCCATGGGAAAAGCCA

301 360
Hs AATCAGGTTTTGACTTTCTTCTGTCAGAAAGACCTAGAGCTTTTATGTCCAAGGTGCAGT
Cf -ATCAAGTTTTGACCTTTTGCTGTCAGAAGGACCTAGAAGTTTTATGTCCACAGTGTAGT
Mm CAACAGGTTTCC---------------------------------TGTCCACTGCGCAGC

361 420
Hs TTGTCCACTGATCACCAGCATCACTGTGTTTGGCCCATAAAGAAGGCTGCCTCCTATCAT
Cf TTCTCCACTCATCACCGGAATCACTATATTTGGCCCATAGAGAAGGCTGCTCCCCATCAT
Mm TTCCCCCC---------GAATCACTTTGTTTGGCCCGTGGAAAATGCTATCGTCTGCCAC

421 480
Hs AGGAAAAAACTGGAGGAATACAATGCACCGTGGAAGGAGAGAGTGGAACTAATTGAAAAA
Cf AGGAAAAGATTGCAGAACTGCATTGAACCATGGAAGGAGAGAATAGAACAAGTCGAAAAA
Mm AGGAAACAAATTGACTGTTACATTAAGCTGTGGAGGGAGATGGTGGAGCCAATCCAGAAA

481 540
Hs GTCATAACTATGCAAACCAGGAAATCACTGGAACTGAAGAAAAAGGTAAAACATAGGGCA
Cf GTGATAATCACGCAAAGCAGAAAATCATTGGAACTGAAGAA---GGTACAATGTAGGAGA
Mm GCAATTAGCACACAAAGGAAAGGATCGCTAGAACTGAGAAAAAGGACAGAATGCAGAAGA

541 600
Hs GAAGAAGTCAAGTCTGAATTTGAGCAACTTAGGTTATTTCTCCAAAATGAGCAAGAGACT
Cf GAAGAAATAAAGTCTGAATTTGAGCGACTTTTGTTGTTTCTCAAAAATGAGCGAGAGATT
Mm GAAAGAGTGAGGTCTCAATATGAACAGAATAGGTTGTTCCTCCAGGTTGAACGGAAGAAG

601 660
Hs GTTCTTAGGCAATTACAAGATGAAGAGATGGATATTTTAGCACAACTAAATGAAAGCCTA
Cf GTTCTTCGGCAATTACAAGATGGAGAAATGGATATTTTAGCCAAACTAAATGAAA-----
Mm ATTCTTGGGCACTTACAAAGTGAAGAGATGGATGGGCTATCCAAACTAAACAAAAACCTA

661 720
Hs ACAAAATTTTCAGATTATACCTCCTCATTAAAATATCTACTAAAGGAGATAGAGAGCATA
Cf ACAACATTTTCAAATTATCTTTCTACATTAAAATATCTCTCAAAGGAAATAGAGGGCAAA
Mm GCGAAATTATCAGATCACACCTCCTTGTTAAAGAGTCTGTTGAAAGATCTAAAGAGCCAG

721 780
Hs TATGTGAAGTCAGAACTGGAATTACTGGCAAATGTTAAGGATATCTATCACAGATATGAG
Cf TATCTGAAGTCAGAGCTGGAATTACTGACAGATATTAAAAGTATCTACTGTAGATATGGA
Mm TGTGAAAAGTCAGAGCTGGCATTGCTGGCAAGTGTTAAAGATTGGTACGAGAGATACAAA

781 840
Hs AATTTAAAATTCCCTGAGCTGTTTTTATTCAAATTAAAAAAATATGGTTACCATCTGCCT
Cf ACCTTAAAGTCCCCTGAACCTTTTTTATTCCAAT-AAAGGAATATGGTTACCATCTTCCT
Mm CAGTCGGGATGGCCTGAGATGGCCTTAGTAACATTGAAAGGGTACGACTACAGGTTACCT

841 900
Hs CCACAATATTCTGGCCTAGACAAAATTATCAAGCGATTTCAAGTAGATGTAATTCTAGAT
Cf CCACAATATTTTGGCCTAAAGAAAATTA---AGAGTTTTCAGGTGGATCTAATTCTAGAT
Mm CTACAGTATTCTGACTTAGACAGAATTATCAAGCGATTTCAAGTTGATGTCATTCTGGAT

901 960
Hs CCTGAAACAGCACATCGTAAACTTATAGTCTCAGAAGATAGAAAAACTGTGCGCTATGGA
Cf TGTGAAACAGCACATCGTAAGCTCGTTATCTCAGAAGATAGAAAAACTGTGTGATATGGA
Mm CCCGAAACAGCAAACTATAAGCTTACAGTCTCAAAGGATAAAAAAACAGTTAAATATGGG

961 1020
Hs AATACAACACAAAATGTACCTCATAACCCAAGAAGATTTTATCTCCTCCCAGCTGTTCTG
Cf ACTAAAGCACATAACTTACCTCGTAACCCAAGGAGGTTTTATCTCTCCCCAGCTGTTCTG
Mm AGTTGGG---AGAGGGTGCCCTATAGCTCAAGAAAATTTTGTTTTGACCCTGCTGTTCTG

1021 1080
Hs GGTTCTAAGGGATATAGTTGTGGCAGGCAGTACTGGGAAGTAGAAGTGAAAGACAAGCCT
Cf AGTTCTATAGGTTATAATTCTGGCAAGCAGTATTGGGAGGTAGAAGTGAAAGACAAGCCT
Mm GGATCTGAGGGATATAGTTCTGACAGACAATACTGGGAGGTTGATGTGGAACTCAAGATG

1081 1140
Hs GAATGGATTCTTGGTGTCTGTAATGACTGTCTTCCC--AG-------------AAGGAGG
Cf GAATGGATCATGGGTGTCTGTAAAGACTCTCCAGAAGGAG-------------AAAGAAT
Mm GAATGGGTTCTAGGGGTCTGTAGGGAGCCTTTTCCCAGGAGCAGGTATGCCGAACGGTTC

1141 1200
Hs AAGAGTCAACCAATTTTAGTACAGGATGGATTATGGGGAATTTGGCGATCTAGTCAGAAT
Cf CAGAATCAACCAGTTTTAGTGCAGGACAGATTATGGGGTGTTGGACGATGTAGTCTGAGT
Mm TCTGATGAACAGTTCTCAGTGCAGGATGGATTATGGGGAGTTGGGCTAGACAATTCCCAA

1201 1260
Hs AATTATATTGTATTGGGCCACAGGGAAATTATTCTGCTGCCACAAGTAATTCCTAGTAAG
Cf AATTATATTGCATTGGGTCCTAGAAAAATTAATCTTCTGCCAAAAGTAATACCTACAAAG
Mm ACTTATGTTGCATTGGGTGGTGAGAAAATCCATCTTCTTCCCAAAGTATCACCTACTAGG

1261 1320
Hs ATTGGCATTTTTTTAGACTATGAAATGAATGAAGTTTCCTTTTATAATTTGAATGATAGA
Cf ACTGGTATTTTTTTAGACTGTGACTTGGGTGAGGTTTCCTTT-ACAATTTGAGTGATAAA
Mm ATTGGGATTTTTTTAGATTCTGAAATGTATGAGGTTTCGTTTTACAATTTGAGGGATAAA

1321 1380
Hs TCTCTTCTCTATACTTTTAATGATAATTTTACAGGAGCACTTTGGCCTTATTTTTATACT
Cf TCTCT-----ATATTTTTAACTAT-----TAAAGAAACAGTCTGGCCTTATTTCTATACT
Mm TCCCTGCTGTACAGGTTTAGCGACTTACCTCGGGGCACATTTTGGCCTTACTTCTACACT

1381 1431
Hs GGAACTGACTCAAAACCTCTTAAAATTTCTACAGTAACAGATTCTGAATGA
Cf GGAACTGACTCAAAACATCTTAAAATCTGTGCAGTAACAGATTCTGAATGA
Mm GGATATGACTACGAGCCTCTGAAGATTTGCACAGTTGCAGATCTTGAGTGA
 
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